Archive Ensembl Home Ensembl Fugu  The Wellcome Trust Sanger Institute  The European Bioinformatics Institute
Fugu Genome Browser
   Ensembl Entry Points
Search for with  
Show Fragment From  To 
Retrieve a sequence  Ensembl Export Data in the format of your choice Advanced data retrieval tool  Ensembl data mining tool
About Fugu Ensembl
Fugu EnsemblFugu Ensembl is a joint project between The IMCB and the EMBL - EBI to produce and maintain an automatic annotation of the Fugu Genome. The Fugu Ensembl project is fully integrated into the wider Ensembl.
Currently, this is a preliminary portal for the annotation of Fugu which is a shotgun sequencing effort by the Fugu Consortium. Please refer to the Fugu Project's Webpage for more details on the Fugu Genome Project.
Fugu Build 2c
This release contains more stringent quality control procedures than the last. In particular, candidate transcripts were rejected if their "coverage" of the parent protein (that is the percentage of residues of the parent protein that align to the predicted gene) fell below a certain threshold (90% for single-exon transcripts, 70% for multi-exon transcripts).
Current Release 25.2c
Last Update:  07-05-2004
Ensembl gene predictions:  22089
(incl. 1293 pseudogenes)   
Genscan gene predictions:  34080
Ensembl gene exons:  225582
Ensembl gene transcripts:  34312
Scaffolds:  20379
Base Pairs:  329140338
Golden Path Length:  329140338
Ensembl What's new
Example Data Points
This release of Fugu data is unassembled, so there are no chromosomes available to browse. Use the BLAST and Search links in the Entry Points section below to locate data.

A few example data points :

  o Gene : Q9I859
  o Transcript : SINFRUT00000161279
  o Peptide : SINFRUP00000161279
  o Family : ENSF00000000010
  o Scaffold : scaffold_5344
Documentation & Help
About Ensembl Ensembl Homepage
For context-sensitive help
on any web page click
Help
Questions or suggestions? Try Ensembl Helpdesk, please send your comments and feedback to here
Documentation (includes tutorial on direct data access & instructions for installing Ensembl on your own site) Ensembl documentation
Ensembl Links and Site Map
Download Ensembl Ensembl Site Map
Ensembl Export Data in the format of your choice
Ensembl data mining tool
Other Species
Ensembl Mosquito Ensembl Honeybee Ensembl C.briggsae Ensembl C.elegans Ensembl Zebrafish Ensembl Fruitfly Ensembl Chicken Ensembl Human Ensembl Mouse Ensembl Chimp Ensembl Rat Ensembl Tetraodon