Honeybee Genome Browser
	Ensembl Entry Points Search for Anything Domain EST Family Gene Marker Peptide Protein Sequence with   Show Fragment From  To  Retrieve a sequence  Advanced data retrieval tool
	About Honeybee Ensembl This site presents an annotation of release 1.1 of the honeybee genome assembly [more]. The honeybee genome sequence was determined by whole genome shotgun at the Human Genome Sequencing Center at Baylor College of Medicine. The data comprises: Repeats and low complexity sequence - which have been identified with RepeatMasker (using the Drosophila melanogaster repeat library) and Dust. Ab initio gene predictions - which have been generated with Genscan. Blast features - showing similarities to entries in Swall from a sensitive search. There are also similarities to the the Drosophila melanogaster proteins and proteins from Anopheles gambiae (est) gene predictions. Gene predictions - generated from a combination of evidence sources: honeybee-specific peptides, Drosophila melanogaster-specific peptides, Anopheles gambiae (est) gene predictions, honeybee-specific ESTs and UNIPROT. This set is incomplete due to a lack of honeybee-specific evidence. Current Release 25.1 Assembly: Baylor release 1.1 of honeybee genome. Last Update:  02-09-2004 Ensembl gene predictions:  9671 Genscan gene predictions:  29832 Ensembl gene exons:  55986 Ensembl gene transcripts:  16948 Contigs:  30074 Scaffolds:  11610 Base Pairs:  197657892 Golden Path Length:  197597744	Example Data Points For this release we have chosen to display data using the scaffolds (or contigs) described in the 1.1 assembly. Use the BLAST and SSAHA buttons in the Entry Points section above to locate data, or enter the assembly fragment (e.g. Group6.9) and basepairs to jump to. A few example data points :    Assembly fragment : Group9.6    Contig : Contig6781.1.39616    Gene : ENSAPMG00000006464    Gene : ENSAPMG00000005929 A number of other sites are also displaying honeybee data or predictions. Notable sites are:    NCBI Entrez Genome Viewer    Texas A&M Honeybee Genome Database    EMBL-heidelberg gene predictions Documentation & Help About Ensembl For context-sensitive help on any web page click Questions or suggestions? Try Documentation (includes tutorial on direct data access & instructions for installing Ensembl on your own site) Ensembl Links and Site Map Other Species